Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7F6_PETMAHomeobox domain-containing protein. (97 aa)    
Predicted Functional Partners:
S4RAE7_PETMA
Uncharacterized protein.
   
 0.751
S4RFT8_PETMA
Uncharacterized protein.
    
 
 0.715
S4RFS3_PETMA
Pancreas associated transcription factor 1a.
    
 
 0.701
S4S184_PETMA
LIM zinc-binding domain-containing protein.
   
 
 0.631
S4RXB3_PETMA
WT1 transcription factor a.
    
 
 0.618
ins
Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 0.598
S4RSW9_PETMA
Neuronal differentiation 1.
   
 0.597
S4R4P4_PETMA
G_PROTEIN_RECEP_F2_4 domain-containing protein.
      
 0.546
S4RKK0_PETMA
G_PROTEIN_RECEP_F2_4 domain-containing protein.
      
 0.546
S4S152_PETMA
Solute carrier family 18 member 3a.
      
 0.540
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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