Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R7G4_PETMANucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family. (397 aa)    
Predicted Functional Partners:
S4RSN8_PETMA
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.873
S4RI02_PETMA
Farnesyltransferase, CAAX box, alpha.
   
 
 0.870
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 
 0.868
S4RJK2_PETMA
Polymerase (DNA-directed), delta interacting protein 3.
   
   0.822
CHURC1-FNTB
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 
 0.820
S4RTU8_PETMA
ElaC ribonuclease Z 1.
   
   0.754
S4R4W9_PETMA
Cyclin B2; Belongs to the cyclin family.
    
 
 0.724
S4RD92_PETMA
SET nuclear proto-oncogene b; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.703
S4R473_PETMA
Zinc finger protein 622.
   
   0.677
S4RGC0_PETMA
Nucleolin.
   
   0.670
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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