Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R7G5_PETMAPH domain-containing protein. (139 aa)    
Predicted Functional Partners:
S4R5P2_PETMA
Uncharacterized protein.
 
   
 0.564
S4RL37_PETMA
Troponin I type 2a (skeletal, fast), tandem duplicate 4.
 
   
 0.543
S4RJ15_PETMA
Uncharacterized protein.
  
   
 0.515
S4RLD3_PETMA
G protein-coupled receptor 26.
  
     0.443
TNNT2
Troponin T type 2b (cardiac).
  
   
 0.439
S4R7P0_PETMA
Transmembrane protein 102.
  
     0.436
GPR78
G protein-coupled receptor 78b.
  
     0.435
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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