Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7G6_PETMASolute carrier family 1 member 4. (471 aa)    
Predicted Functional Partners:
S4RC47_PETMA
Uncharacterized protein.
    
   0.667
S4R7L4_PETMA
Uncharacterized protein.
  
 
 0.644
S4RXL8_PETMA
Aamy domain-containing protein.
  
 
 0.602
S4RUF7_PETMA
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
     
 0.599
S4R9B9_PETMA
5-methyltetrahydrofolate-homocysteine methyltransferase.
    
 0.567
S4RM73_PETMA
Solute carrier family 3 member 1.
  
 
 0.555
S4RRN2_PETMA
Uncharacterized protein.
   
 
 0.542
S4RKX5_PETMA
Solute carrier family 13 member 1.
    
 0.537
S4RZN0_PETMA
Solute carrier family 13 member 4.
    
 0.537
S4REU6_PETMA
Uncharacterized protein.
    
 0.536
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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