Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R7H1_PETMAJagunal homolog 1b. (160 aa)    
Predicted Functional Partners:
S4R837_PETMA
Plug_translocon domain-containing protein.
    
 
 0.704
S4RQ93_PETMA
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
   
   0.663
S4R914_PETMA
J domain-containing protein.
      
 0.640
S4S007_PETMA
Uncharacterized protein.
      
 0.613
S4RCM9_PETMA
Secretory carrier-associated membrane protein.
   
 
 0.612
S4RIL3_PETMA
Uncharacterized protein.
      
 0.560
S4R4C0_PETMA
Integral membrane protein 2Ba.
      
 0.513
S4RTF6_PETMA
Solute carrier family 35 member C2.
   
 
 0.509
S4RMP2_PETMA
Uncharacterized protein.
      
 0.480
S4RW34_PETMA
Proteasome subunit beta.
      
 0.460
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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