Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7H2_PETMAUncharacterized protein. (1898 aa)    
Predicted Functional Partners:
S4RWQ1_PETMA
Uncharacterized protein.
 
 
 0.898
S4RER4_PETMA
Uncharacterized protein.
   
 0.723
S4RN02_PETMA
Uncharacterized protein.
   
 0.723
ATP8A1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.676
S4RE61_PETMA
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.672
BCL3
BCL3 transcription coactivator.
    
 0.671
S4RMB4_PETMA
Uncharacterized protein.
   
 0.663
S4RAH1_PETMA
Si:ch211-117c9.2.
      
 0.638
S4RL81_PETMA
PDZ domain-containing protein.
    
 
 0.632
S4RL83_PETMA
PDZ domain-containing protein.
    
 
 0.632
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (10%) [HD]