STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7I4_PETMASin3A-associated protein. (136 aa)    
Predicted Functional Partners:
S4RM85_PETMA
ARID domain-containing protein.
   
 
 0.988
S4RN39_PETMA
AT rich interactive domain 4A (RBP1-like).
   
 
 0.988
S4RNS0_PETMA
Poly(A) binding protein, nuclear 1.
   
 0.978
S4RDQ2_PETMA
Pinin, desmosome associated protein.
    
 0.976
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
   
 
 0.940
SAP30
Sin3A associated protein 30.
     
 0.889
S4RC87_PETMA
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.878
S4R8K9_PETMA
HDAC_interact domain-containing protein.
    
 0.864
S4RJK2_PETMA
Polymerase (DNA-directed), delta interacting protein 3.
   
 
 0.862
S4RLS2_PETMA
Serine and arginine rich splicing factor 2b.
   
 0.844
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.