Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R7I4_PETMASin3A-associated protein. (136 aa)    
Predicted Functional Partners:
S4RDQ2_PETMA
Pinin, desmosome associated protein.
    
 0.999
SAP30
Sin3A associated protein 30.
    
 0.987
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
   
 
 0.979
S4RNS0_PETMA
Poly(A) binding protein, nuclear 1.
   
 0.968
S4RC87_PETMA
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.961
RBM39
RNA binding motif protein 39.
    
 0.947
RBM39-2
RNA binding motif protein 39.
    
 0.947
S4RM85_PETMA
ARID domain-containing protein.
   
 0.932
S4RN39_PETMA
AT rich interactive domain 4A (RBP1-like).
   
 0.932
S4R8K9_PETMA
HDAC_interact domain-containing protein.
    
 0.901
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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