STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7I7_PETMAMitochondrial ribosomal protein S7. (231 aa)    
Predicted Functional Partners:
S4RSL0_PETMA
Eukaryotic translation elongation factor 1 gamma; Belongs to the GST superfamily.
   
 
 0.999
S4R4U3_PETMA
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.998
S4R718_PETMA
Ribosomal protein L4.
  
 0.998
S4R7M9_PETMA
Uncharacterized protein.
   
 0.998
RPS3A
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.998
S4RAC1_PETMA
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
 0.998
S4RBQ3_PETMA
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.998
RPSA
Ribosomal protein SA.
  
 0.998
S4RJC2_PETMA
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.998
S4RJV4_PETMA
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.998
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.