Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7I8_PETMASi:ch1073-228j22.2. (214 aa)    
Predicted Functional Partners:
S4RIQ9_PETMA
Cullin 5a; Belongs to the cullin family.
    
 0.929
S4RTH7_PETMA
Elongin C paralog a; Belongs to the SKP1 family.
    
  0.925
S4RQI1_PETMA
Uncharacterized protein.
    
 
 0.901
S4RHX4_PETMA
Cullin 1b; Belongs to the cullin family.
   
 0.822
S4RFA0_PETMA
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.815
S4RHW6_PETMA
Tetratricopeptide repeat domain 1.
    
   0.667
S4R778_PETMA
Cytokine inducible SH2-containing protein b.
     
 0.638
S4RR98_PETMA
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.626
COPS7B
COP9 signalosome subunit 7B.
     
 0.610
S4RCD2_PETMA
Cullin-associated and neddylation-dissociated 1.
     
  0.605
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.