Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R7J2_PETMAATP-binding cassette, sub-family G (WHITE), member 1. (233 aa)    
Predicted Functional Partners:
S4RLX7_PETMA
ATP-binding cassette, sub-family G (WHITE), member 2b.
 
   
 0.831
S4RHH2_PETMA
ATP-binding cassette, sub-family B (MDR/TAP), member 8.
  
 0.773
S4RC39_PETMA
Uncharacterized protein.
   
 0.759
S4RMI9_PETMA
Uncharacterized protein.
   
 0.759
S4RXA8_PETMA
ATP-binding cassette, sub-family B (MDR/TAP), member 10.
  
 0.744
S4RAP4_PETMA
ATP-binding cassette, sub-family D (ALD), member 4.
      
 0.739
S4RKL2_PETMA
RUN domain-containing protein.
     
 0.735
S4R7D0_PETMA
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
  
 0.700
S4RA04_PETMA
Xenotropic and polytropic retrovirus receptor 1a.
    
 
 0.687
S4RYP7_PETMA
Mitogen-activated protein kinase 15.
      
 0.683
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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