Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7J4_PETMAPeptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (145 aa)    
Predicted Functional Partners:
S4RM09_PETMA
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
 
      0.900
S4RSK1_PETMA
Uncharacterized protein.
    
 0.687
S4RCY2_PETMA
Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.
    
 0.624
S4RKI4_PETMA
Apoptotic peptidase activating factor 1.
    
 0.617
S4RGW1_PETMA
Cathepsin O; Belongs to the peptidase C1 family.
   
 0.579
S4RX47_PETMA
Cathepsin F; Belongs to the peptidase C1 family.
   
 0.579
ins
Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
    
 0.556
S4RIP9_PETMA
Heat shock protein 5; Belongs to the heat shock protein 70 family.
    
 
 0.529
S4R5D1_PETMA
Cathepsin Bb; Belongs to the peptidase C1 family.
   
 0.486
S4R5X5_PETMA
Cathepsin C; Belongs to the peptidase C1 family.
   
 0.486
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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