Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
S4R7J5_PETMAIon_trans domain-containing protein. (100 aa)    
Predicted Functional Partners:
S4RCM6_PETMA
Zgc:110224.
 
    
 0.776
S4R6T6_PETMA
Uncharacterized protein.
    
 0.751
S4RAN1_PETMA
SAM domain-containing protein.
    
 0.722
S4R8I5_PETMA
Transient receptor potential cation channel, subfamily M, member 2.
    
 0.691
S4R483_PETMA
Uncharacterized protein.
    
 0.673
NPHS2
NPHS2 stomatin family member, podocin.
    
 
 0.644
S4RL61_PETMA
ANK_REP_REGION domain-containing protein.
   
 
 0.577
S4RFG9_PETMA
Phosphoinositide phospholipase C.
   
 
 0.538
S4RAU5_PETMA
Hydrogen voltage-gated channel 1.
    
 0.485
S4RIW0_PETMA
Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
      
 0.470
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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