Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7L4_PETMAUncharacterized protein. (279 aa)    
Predicted Functional Partners:
S4RUW3_PETMA
GTP_cyclohydroI domain-containing protein.
     
 0.715
S4RX20_PETMA
SUN domain-containing protein.
    
 
 0.672
S4RXL8_PETMA
Aamy domain-containing protein.
   
 0.670
S4R9W5_PETMA
Arginase.
  
 
 0.663
S4RXA2_PETMA
Proprotein convertase subtilisin/kexin type 2.
   
 
 0.646
S4R7G6_PETMA
Solute carrier family 1 member 4.
  
 
 0.644
S4RM73_PETMA
Solute carrier family 3 member 1.
   
 0.644
S4RZ23_PETMA
ADP ribosylation factor like GTPase 3b; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.644
S4S170_PETMA
Amino acid transporter.
  
 
 0.644
S4RBM6_PETMA
Mitochondrial ribosomal protein L45.
      
 0.610
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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