STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7M1_PETMAUncharacterized protein. (220 aa)    
Predicted Functional Partners:
S4RNC8_PETMA
Chaperonin containing TCP1, subunit 5 (epsilon).
   
 0.995
S4RA53_PETMA
Uncharacterized protein; Belongs to the TCP-1 chaperonin family.
   
 0.994
S4R5R5_PETMA
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
 0.993
S4RXN3_PETMA
McKusick-Kaufman syndrome.
   
 0.992
S4RA01_PETMA
T-complex protein 1 subunit gamma.
   
 0.963
S4RGK5_PETMA
DUF4209 domain-containing protein.
   
 0.963
PDCL3
Phosducin like 3.
    
 
 0.894
S4R4Z7_PETMA
DEAQ box RNA-dependent ATPase 1.
   
   0.852
S4RMK2_PETMA
Uncharacterized protein.
    
 
 0.806
S4RTM3_PETMA
tRNA-binding domain-containing protein.
  
 
 0.781
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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