Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R7N0_PETMALeucine-rich repeats and immunoglobulin-like domains 3. (529 aa)    
Predicted Functional Partners:
S4RJF2_PETMA
Sema domain-containing protein.
    
 0.743
S4RWV5_PETMA
Protein kinase domain-containing protein.
    
 0.743
S4RWP1_PETMA
MPN domain-containing protein.
    
 0.598
S4R6P1_PETMA
Cbl-PTB domain-containing protein.
    
  0.580
S4RKR8_PETMA
Leukocyte receptor tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.570
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
  0.569
S4RIE0_PETMA
PCI domain-containing protein.
    
 0.548
S4RHX2_PETMA
Uncharacterized protein.
    
 
 0.539
S4RL42_PETMA
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.538
S4RQP0_PETMA
Protein kinase domain-containing protein.
    
 0.517
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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