Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
S4R7P3_PETMATSC complex subunit 2. (1816 aa)    
Predicted Functional Partners:
S4R5N6_PETMA
TSC complex subunit 1b.
   
 0.999
S4RBA8_PETMA
TBC1 domain family, member 7.
    
 0.999
S4RTA2_PETMA
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.998
S4R5X8_PETMA
Ras homolog, mTORC1 binding.
    
 0.997
S4RYE8_PETMA
Ras homolog, mTORC1 binding like 1.
    
 0.996
S4RMW1_PETMA
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b; Belongs to the 14-3-3 family.
    
 0.987
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
 0.976
S4R5X0_PETMA
Crystallin, gamma N1; Belongs to the beta/gamma-crystallin family.
    
 0.965
RPS6KA3
Ribosomal protein S6 kinase A3; Belongs to the protein kinase superfamily.
    
 0.953
S4RHI2_PETMA
Protein kinase domain-containing protein.
    
 0.953
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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