STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7P3_PETMATSC complex subunit 2. (1816 aa)    
Predicted Functional Partners:
S4R5N6_PETMA
TSC complex subunit 1b.
   
 0.999
S4RBA8_PETMA
TBC1 domain family, member 7.
    
 0.999
S4R5X8_PETMA
Ras homolog, mTORC1 binding.
    
 0.979
S4R5X0_PETMA
Crystallin, gamma N1; Belongs to the beta/gamma-crystallin family.
    
 0.971
S4RYE8_PETMA
Ras homolog, mTORC1 binding like 1.
    
 0.971
S4R4N4_PETMA
Heat shock protein 90 alpha family class A member 1.
    
 0.966
S4RDV2_PETMA
Heat shock protein 90 alpha family class A member 1.
    
 0.966
S4R7R0_PETMA
Heat shock protein 90, beta (grp94), member 1.
    
 0.950
S4RTA2_PETMA
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.921
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 0.903
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.