STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7P9_PETMASCP domain-containing protein. (105 aa)    
Predicted Functional Partners:
S4RKL9_PETMA
Phosphoribosyl pyrophosphate amidotransferase.
    
  0.642
S4RIV5_PETMA
N-acetylneuraminic acid phosphatase.
     
 0.614
S4R7S3_PETMA
Cytidine monophosphate N-acetylneuraminic acid synthetase a.
     
 0.612
S4RJA9_PETMA
PEPCK_GTP domain-containing protein.
   
 
  0.600
S4RAR7_PETMA
L-2-hydroxyglutarate dehydrogenase.
    
  0.588
S4RX09_PETMA
NADH:ubiquinone oxidoreductase core subunit V2.
    
  0.583
S4RZW6_PETMA
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
  0.582
S4RKV5_PETMA
Beclin 1, autophagy related.
    
 
 0.422
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.