Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
S4R7Q0_PETMAParkinson protein 7. (189 aa)    
Predicted Functional Partners:
S4RQA2_PETMA
Ion_trans domain-containing protein.
    
 
 0.918
TPI1
Triosephosphate isomerase.
  
 
 0.897
SODM_PETMA
Superoxide dismutase [Mn], mitochondrial; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
   
 0.860
S4R9T7_PETMA
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 
 0.853
S4R4C4_PETMA
Gamma-synuclein; Belongs to the synuclein family.
    
 
 0.850
S4RHD9_PETMA
Uncharacterized protein.
   
 
 0.837
S4REL5_PETMA
Uncharacterized protein.
  
 0.809
S4R7N7_PETMA
NADH:ubiquinone oxidoreductase subunit B7.
   
 
 0.789
S4RL48_PETMA
SGL domain-containing protein.
  
 
  0.785
S4RFB7_PETMA
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
   0.778
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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