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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7Q1_PETMAUncharacterized protein. (279 aa)    
Predicted Functional Partners:
S4R7J4_PETMA
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.734
S4RM09_PETMA
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.734
S4RQ70_PETMA
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.734
S4RGW1_PETMA
Cathepsin O; Belongs to the peptidase C1 family.
   
 0.628
S4RX47_PETMA
Cathepsin F; Belongs to the peptidase C1 family.
   
 0.628
S4R4Q1_PETMA
Biorientation of chromosomes in cell division 1.
    
 0.587
S4RCJ7_PETMA
BetaGal_dom4_5 domain-containing protein.
    
 0.587
S4RJX4_PETMA
Beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b; Belongs to the glycosyl hydrolase 35 family.
    
 0.587
S4RPN5_PETMA
Beta-galactosidase.
    
 0.587
S4RMK0_PETMA
Uncharacterized protein.
     
 0.576
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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