Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R7R5_PETMAUncharacterized protein. (82 aa)    
Predicted Functional Partners:
S4R7R1_PETMA
Si:ch211-68a17.7.
   
 
 0.814
S4RYP6_PETMA
Lipid droplet associated hydrolase.
      
 0.757
S4RDP8_PETMA
Transmembrane protein 223.
      
 0.680
S4RF59_PETMA
Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins.
      
 0.674
S4RMZ2_PETMA
Si:zfos-1192g2.3.
   
  
 0.672
S4RDV9_PETMA
Single-pass membrane protein with aspartate-rich tail 1a.
   
  
 0.654
S4RGU1_PETMA
GTP-binding protein 10 (putative).
      
 0.639
NT5DC2
5'-nucleotidase domain containing 2.
      
 0.639
DDX28
DEAD-box helicase 28.
      
 0.636
S4RCP7_PETMA
2-oxoglutarate and iron-dependent oxygenase domain containing 2.
      
 0.613
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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