STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7R9_PETMACalcineurin-like phosphoesterase domain containing 1. (158 aa)    
Predicted Functional Partners:
S4RC18_PETMA
Acid phosphatase 1.
    
 0.853
S4RK19_PETMA
Uncharacterized protein; Belongs to the alkaline phosphatase family.
  
 
 0.853
S4RT25_PETMA
Epoxide hydrolase 2, cytoplasmic.
    
 0.849
S4RPC1_PETMA
FGFR1 oncogene partner.
   
 
 0.832
S4RTS3_PETMA
Riboflavin kinase.
    
 0.821
S4RPJ4_PETMA
Pseudouridine 5'-phosphatase.
  
 
 0.808
S4RNY9_PETMA
Phosphoglucomutase 2; Belongs to the phosphohexose mutase family.
  
 
  0.768
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
    
  0.764
S4R6G7_PETMA
Tartrate-resistant acid phosphatase type 5.
     
 0.758
S4RSQ5_PETMA
Uncharacterized protein.
    
  0.751
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.