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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7S5_PETMASH3 and SYLF domain containing 1. (134 aa)    
Predicted Functional Partners:
S4R7T0_PETMA
WH2 domain-containing protein.
    
 
 0.711
S4RFJ4_PETMA
WASP like actin nucleation promoting factor.
    
 
 0.711
S4RNZ0_PETMA
WASP like actin nucleation promoting factor.
    
 
 0.711
S4RY60_PETMA
Uncharacterized protein.
    
 
 0.711
S4RQ25_PETMA
Uncharacterized protein.
   
   0.686
S4RT45_PETMA
Uncharacterized protein.
    
  0.541
S4R5R7_PETMA
Arf-GAP domain-containing protein.
    
 
 0.523
S4R8S2_PETMA
Small ArfGAP 1.
    
 
 0.523
S4RK26_PETMA
Glutamine-fructose-6-phosphate transaminase 2.
   
    0.463
S4RVF7_PETMA
Glutamine-fructose-6-phosphate transaminase 2.
   
    0.463
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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