Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7S5_PETMASH3 and SYLF domain containing 1. (134 aa)    
Predicted Functional Partners:
S4RQ25_PETMA
Uncharacterized protein.
    
   0.963
S4REJ1_PETMA
VPS37C subunit of ESCRT-I.
    
   0.847
S4R5R7_PETMA
Arf-GAP domain-containing protein.
    
 
 0.742
S4R8S2_PETMA
Small ArfGAP 1.
    
 
 0.742
S4RHV6_PETMA
NR LBD domain-containing protein.
    
 
 0.670
S4RFX3_PETMA
ADF-H domain-containing protein.
   
 
 0.669
DBNL
Drebrin like.
   
 
 0.669
S4RC18_PETMA
Acid phosphatase 1.
      
 0.664
NTPCR
Nucleoside-triphosphatase, cancer-related.
      
 0.657
S4R7T0_PETMA
WH2 domain-containing protein.
    
 
 0.647
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.