Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R7S6_PETMARAB35, member RAS oncogene family b. (126 aa)    
Predicted Functional Partners:
S4RUS8_PETMA
UDENN domain-containing protein.
    
 0.981
S4R920_PETMA
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.955
S4RRC0_PETMA
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.955
S4RBB7_PETMA
TBC1 domain family, member 10b.
   
 0.943
S4RWD7_PETMA
Uncharacterized protein.
    
 0.939
S4RAS9_PETMA
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.935
S4RKI6_PETMA
Intraflagellar transport 88 homolog.
    
 0.935
TBC1D13
TBC1 domain family member 13.
     
 0.932
S4RZP3_PETMA
RING-type domain-containing protein.
    
 0.927
S4R4Q5_PETMA
Fleer.
    
 0.914
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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