Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R7T9_PETMAC2 domain-containing protein. (234 aa)    
Predicted Functional Partners:
S4RCH7_PETMA
Uncharacterized protein.
    
 0.993
S4RQR8_PETMA
Uncharacterized protein.
    
 0.993
S4RWQ4_PETMA
RAB3C, member RAS oncogene family.
    
 0.988
S4RGE1_PETMA
Uncharacterized protein.
   
 0.983
S4RGI8_PETMA
Unc-13 homolog C.
   
 0.983
S4RLK2_PETMA
C2 domain-containing protein.
   
 0.983
S4RLP5_PETMA
Unc-13 homolog C.
   
 0.983
S4RMJ7_PETMA
Uncharacterized protein.
   
 
 0.979
S4RIH3_PETMA
PDZ domain-containing protein.
 
 
 0.956
S4RFZ8_PETMA
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.951
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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