Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
S4R7U1_PETMAFilamin A interacting protein 1b. (1065 aa)    
Predicted Functional Partners:
S4RPE1_PETMA
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
 
    
 0.681
S4R8P6_PETMA
Programmed cell death 10a.
    
   0.669
S4R9H0_PETMA
Jumonji, AT rich interactive domain 2a.
      
 0.654
TIAM2
T cell lymphoma invasion and metastasis 2.
      
 0.640
S4RHS7_PETMA
NMDA receptor synaptonuclear signaling and neuronal migration factor a.
      
 0.638
ARHGEF11
Rho guanine nucleotide exchange factor 11.
    
 
 0.631
S4RNS4_PETMA
DUF3402 domain-containing protein.
    
   0.627
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
   
   0.613
S4RMK2_PETMA
Uncharacterized protein.
   
 0.605
S4RVX9_PETMA
WD repeat domain 90.
   
 0.605
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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