Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R7U3_PETMAProtein kinase domain-containing protein. (289 aa)    
Predicted Functional Partners:
S4RKV5_PETMA
Beclin 1, autophagy related.
    
 0.934
S4RG64_PETMA
Death-associated protein kinase 1.
     
 
0.900
S4RK73_PETMA
Rho guanine nucleotide exchange factor (GEF) 25b.
 
  
  0.896
S4RPF0_PETMA
Uncharacterized protein.
 
  
   0.830
CALML3
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.763
CALM3
Calmodulin 3; Belongs to the calmodulin family.
    
 0.763
S4RL94_PETMA
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.763
S4R982_PETMA
Trio Rho guanine nucleotide exchange factor.
 
  
  0.757
S4RJG3_PETMA
Kelch-like family member 20.
    
 
 0.728
S4RVU5_PETMA
Trio Rho guanine nucleotide exchange factor.
 
  
  0.725
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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