Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R7U4_PETMACms1 ribosomal small subunit homolog. (204 aa)    
Predicted Functional Partners:
S4RRJ1_PETMA
WD repeat domain 36.
   
  0.965
S4RC43_PETMA
UTP4 small subunit processome component.
   
  0.958
S4RN64_PETMA
U3snoRNP10 domain-containing protein.
   
  0.927
S4RZ74_PETMA
UTP6 small subunit processome component.
   
  0.893
S4RD17_PETMA
Nucleolar protein 10.
   
 
  0.882
S4RNL0_PETMA
Uncharacterized protein.
   
  0.861
S4RQR4_PETMA
LTV1 ribosome biogenesis factor.
   
    0.856
S4RPM6_PETMA
BP28CT domain-containing protein.
   
   0.847
S4RDD2_PETMA
RRM domain-containing protein.
   
  
 0.846
S4REJ8_PETMA
NOP14 nucleolar protein homolog (yeast).
   
 
  0.829
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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