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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3GLB2BAR domain-containing protein. (223 aa)    
Predicted Functional Partners:
S4RS87_PETMA
SH3 domain-containing protein.
    
 0.801
S4RHC0_PETMA
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.750
SH3GL1
SH3 domain containing GRB2 like 1, endophilin A2.
  
  
0.671
SH3GL1-2
SH3 domain containing GRB2 like 1, endophilin A2.
     
0.655
S4RM11_PETMA
Ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase); Belongs to the peptidase C19 family.
   
   0.555
S4RFB4_PETMA
BCL2 associated athanogene 1.
   
   0.468
S4RA78_PETMA
Uncharacterized protein.
     
 0.410
EGFR
Protein kinase domain-containing protein.
     
 0.410
S4RD75_PETMA
Receptor protein-tyrosine kinase.
     
 0.410
S4RKR3_PETMA
Protein kinase domain-containing protein.
     
 0.410
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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