Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7V3_PETMATransmembrane protein 107. (136 aa)    
Predicted Functional Partners:
S4RIF1_PETMA
PRA1 family protein.
    
   0.741
S4RW08_PETMA
HID1 domain containing b.
      
 0.665
S4RDB6_PETMA
Laminin N-terminal domain-containing protein.
      
 0.664
S4S1R0_PETMA
Dopamine receptor D1b; Belongs to the G-protein coupled receptor 1 family.
      
 0.643
S4RDP6_PETMA
Zinc finger and BTB domain containing 49.
      
 0.593
S4R707_PETMA
Uncharacterized protein.
      
 0.472
S4R5T3_PETMA
Uncharacterized protein.
      
 0.458
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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