Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7V7_PETMAUncharacterized protein. (545 aa)    
Predicted Functional Partners:
VIT
Vitrin.
    
 0.670
S4R9T9_PETMA
PID domain-containing protein.
    
 
 0.620
S4RYE5_PETMA
Limb and CNS expressed 1.
   
  
 0.604
S4REI2_PETMA
Molybdenum cofactor synthesis 3.
   
   0.596
S4RQ20_PETMA
Solute carrier family 52 member 3.
      
 0.592
S4RSA5_PETMA
Uncharacterized protein.
     
 0.591
S4RW39_PETMA
C19h1orf109 homolog (H. sapiens).
   
    0.573
ATP8A1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.560
S4RB62_PETMA
Uncharacterized protein.
   
    0.539
S4RB93_PETMA
Solute carrier family 17 member 6b.
      
 0.538
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.