Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PDP1Pyruvate dehyrogenase phosphatase catalytic subunit 1. (388 aa)    
Predicted Functional Partners:
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.946
S4RLU2_PETMA
Dihydrolipoyl dehydrogenase.
  
 0.768
S4RC94_PETMA
Dimethylglycine dehydrogenase.
   
 0.694
S4R6B3_PETMA
Protein phosphatase; Belongs to the PP2C family.
    
 
 0.632
S4RQE0_PETMA
Retinoblastoma binding protein 5.
      
 0.617
S4RNH0_PETMA
Reticulon.
    
 
 0.610
S4RTK8_PETMA
Sarcosine dehydrogenase.
   
 0.590
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
   
   0.589
S4RMK2_PETMA
Uncharacterized protein.
    
   0.584
S4RVX9_PETMA
WD repeat domain 90.
    
   0.584
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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