Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7X9_PETMAPeptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (328 aa)    
Predicted Functional Partners:
S4RA89_PETMA
Uncharacterized protein.
 
  
   0.673
S4R956_PETMA
Uncharacterized protein.
    
 0.621
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
    
 0.601
S4R793_PETMA
Tissue factor pathway inhibitor 2.
    
 0.563
S4R5D1_PETMA
Cathepsin Bb; Belongs to the peptidase C1 family.
     
 0.536
S4RSA5_PETMA
Uncharacterized protein.
   
 0.529
S4REY0_PETMA
Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.
    
  0.521
FGG
Fibrinogen gamma chain; Together with fibrinogen alpha (FGA) and fibrinogen beta (FGB), polymerizes to form an insoluble fibrin matrix. Has a major function in hemostasis as one of the primary components of blood clots.
   
 0.508
S4RMK2_PETMA
Uncharacterized protein.
    
 0.504
S4RVX9_PETMA
WD repeat domain 90.
    
 0.504
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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