Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7Z4_PETMALeukotriene C4 synthase. (148 aa)    
Predicted Functional Partners:
S4RFK5_PETMA
Lipoxygenase domain-containing protein.
    
 0.952
S4RRI8_PETMA
Leuk-A4-hydro_C domain-containing protein.
     
 0.948
S4RNB8_PETMA
Lipoxygenase domain-containing protein.
    
 0.925
S4RCZ7_PETMA
Lipoxygenase domain-containing protein.
    
 0.923
S4RK64_PETMA
Uncharacterized protein.
     
 0.908
S4RKC0_PETMA
Uncharacterized protein.
     
 0.908
S4RLU5_PETMA
Uncharacterized protein.
     
 0.908
S4RZD6_PETMA
Microsomal glutathione S-transferase 1.1.
    
 0.754
S4RDF3_PETMA
Nucleoredoxin like 1.
      
 0.654
S4RRI9_PETMA
Peptidase_M1 domain-containing protein.
      
 0.505
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (14%) [HD]