Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
S4R7Z5_PETMATRAF-interacting protein. (422 aa)    
Predicted Functional Partners:
S4RTM7_PETMA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.913
S4RS66_PETMA
TNF receptor-associated factor.
    
 
 0.905
S4RQY1_PETMA
Microtubule-associated protein, RP/EB family, member 3b.
    
   0.886
S4RD41_PETMA
Nei-like DNA glycosylase 3.
   
  
 0.824
S4R4E5_PETMA
TNF receptor-associated factor.
    
 
 0.803
S4RPK0_PETMA
Uncharacterized protein.
   
 
 0.764
S4RJ70_PETMA
Zgc:77287.
   
  
 0.740
S4RFF2_PETMA
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 
 0.720
S4RPC2_PETMA
F-box domain-containing protein.
   
  
 0.684
S4RMF7_PETMA
UBX domain protein 7.
   
  
 0.670
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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