Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASF1AAnti-silencing function 1A histone chaperone. (222 aa)    
Predicted Functional Partners:
S4RUA1_PETMA
TPR_REGION domain-containing protein.
    
 0.998
S4RVZ4_PETMA
Uncharacterized protein.
    
 0.997
S4RLY1_PETMA
CAF1-p150_C2 domain-containing protein.
   
 
 0.974
S4RD97_PETMA
ATP-dependent DNA helicase; Belongs to the helicase family.
   
 
 0.973
S4REP1_PETMA
Codanin-1_C domain-containing protein.
    
 
 0.970
MCM2
Minichromosome maintenance complex component 2.
   
 
 0.968
S4RP55_PETMA
Histone acetyltransferase 1.
   
 
 0.967
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
   
 
 0.964
S4R481_PETMA
K(lysine) acetyltransferase 2B.
    
 
 0.942
S4RRA4_PETMA
Mortality factor 4 like 1.
   
 
 0.938
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.