Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBLN5Fibulin 5. (452 aa)    
Predicted Functional Partners:
S4R4E3_PETMA
Uncharacterized protein.
 
  
   0.904
S4RHA4_PETMA
Uncharacterized protein.
 
  
  0.885
S4RSX2_PETMA
Complement factor properdin.
 
  
 0.812
S4RIB2_PETMA
Si:ch211-225b10.4.
      
 0.685
S4RA10_PETMA
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 
 0.675
S4R861_PETMA
Fibroblast growth factor (acidic) intracellular binding protein b.
 
      0.555
S4RND0_PETMA
Uncharacterized protein.
 
  
  0.547
S4R848_PETMA
Uncharacterized protein.
    
  0.515
S4RF48_PETMA
Growth arrest-specific 7a.
    
 0.502
S4RM85_PETMA
ARID domain-containing protein.
    
 0.502
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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