Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R810_PETMAUncharacterized protein. (334 aa)    
Predicted Functional Partners:
S4R9U6_PETMA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
 
 0.960
S4R846_PETMA
GST C-terminal domain-containing protein.
      
 0.627
S4RRI1_PETMA
Neuralized E3 ubiquitin protein ligase 2.
      
 0.496
S4RF48_PETMA
Growth arrest-specific 7a.
    
  0.491
S4R946_PETMA
Uncharacterized protein.
    
 0.475
AP3B2
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
      
 0.458
S4RW66_PETMA
Uncharacterized protein.
   
  
 0.450
S4RTC7_PETMA
Uncharacterized protein.
    
 0.424
LRRC2
Leucine rich repeat containing 2.
   
 
 0.403
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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