STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R815_PETMAVGCC_alpha2 domain-containing protein. (410 aa)    
Predicted Functional Partners:
S4RL35_PETMA
Calcium channel, voltage-dependent, alpha 2/delta subunit 4b.
 
  
 0.975
S4RKP1_PETMA
Calcium channel, voltage-dependent, gamma subunit 1a.
    
 0.944
S4RE36_PETMA
GuKc domain-containing protein.
   
 0.868
S4RW72_PETMA
SH3 domain-containing protein.
   
 0.868
S4R693_PETMA
Uncharacterized protein.
   
 0.750
S4REI7_PETMA
Ion_trans domain-containing protein.
   
 0.750
S4RJA1_PETMA
Uncharacterized protein.
   
 0.750
S4RR27_PETMA
Voltage-dependent L-type calcium channel 1c.
   
 0.750
S4RTQ2_PETMA
Uncharacterized protein.
   
 0.750
S4RYW0_PETMA
Ion_trans domain-containing protein.
   
 0.750
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.