Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R822_PETMAUncharacterized protein. (283 aa)    
Predicted Functional Partners:
S4R824_PETMA
Uncharacterized protein.
 
     0.948
S4RQY1_PETMA
Microtubule-associated protein, RP/EB family, member 3b.
    
 0.615
ENSPMAP00000010978
annotation not available
    
 0.615
S4RW77_PETMA
Cytoskeleton associated protein 5.
    
 0.611
S4R495_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.507
S4REI3_PETMA
Baculoviral IAP repeat containing 6.
  
  0.507
S4RTD7_PETMA
Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b.
    
 0.507
S4R661_PETMA
CAP-Gly domain-containing protein.
    
  0.494
S4RAD6_PETMA
Uncharacterized protein.
    
 0.471
S4REZ4_PETMA
Uncharacterized protein.
    
 0.471
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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