Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R831_PETMACilia and flagella associated protein 298. (290 aa)    
Predicted Functional Partners:
S4S020_PETMA
Dynein axonemal assembly factor 4.
      
 0.773
S4RSG3_PETMA
Leucine rich repeat containing 6.
      
 0.708
S4RFB6_PETMA
Zinc finger, MYND-type containing 10.
    
 
 0.690
S4RXP7_PETMA
Uncharacterized protein.
      
 0.689
DNAAF5
Dynein axonemal assembly factor 5.
      
 0.687
S4RTZ0_PETMA
Uncharacterized protein.
      
 0.666
S4RU66_PETMA
POC5 centriolar protein homolog (Chlamydomonas).
      
 0.646
S4RY15_PETMA
Cilia and flagella associated protein 52.
   
  
 0.642
PIH1D3
PIH1 domain containing 3.
   
  
 0.641
S4RDJ7_PETMA
Coiled-coil domain containing 103.
      
 0.635
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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