STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFYBNuclear transcription factor Y subunit beta; Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes. NF-Y can function as both an activator and a repressor, depending on its interacting cofactors; Belongs to the NFYB/HAP3 subunit family. (209 aa)    
Predicted Functional Partners:
S4R791_PETMA
Nuclear transcription factor Y, alpha.
   
 0.999
S4RLY7_PETMA
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
     
 0.766
S4RDV0_PETMA
Uncharacterized protein.
    
 
 0.752
S4RQD6_PETMA
GATA binding protein 3.
    
 
 0.752
S4RCM4_PETMA
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
     
 0.748
MTERF1
Mitochondrial transcription termination factor 1.
   
    0.729
S4R4S7_PETMA
GATA binding protein 4.
    
 
 0.675
S4R667_PETMA
Uncharacterized protein.
    
 
 0.675
S4RMF9_PETMA
DR1-associated protein 1 (negative cofactor 2 alpha).
    
 
 0.661
S4RQ83_PETMA
Tonsoku-like, DNA repair protein.
     
 0.575
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (28%) [HD]