STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R834_PETMADEP domain-containing protein. (157 aa)    
Predicted Functional Partners:
S4RZP1_PETMA
Uncharacterized protein.
    
 0.989
S4RF48_PETMA
Growth arrest-specific 7a.
    
 0.986
S4R6H5_PETMA
NKD inhibitor of WNT signaling pathway 2a.
    
 0.976
S4RVX7_PETMA
Uncharacterized protein.
    
 0.968
S4R6T4_PETMA
Frizzled class receptor 3b; Belongs to the G-protein coupled receptor Fz/Smo family.
  
 
 0.938
S4RC42_PETMA
G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.920
S4RZB8_PETMA
Uncharacterized protein.
    
 0.916
S4RYU9_PETMA
Testis derived transcript (3 LIM domains).
    
 0.914
S4RKD3_PETMA
RGS domain-containing protein.
   
 0.912
S4RR12_PETMA
DIX domain-containing protein.
   
 0.912
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.