Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
S4R837_PETMAPlug_translocon domain-containing protein. (473 aa)    
Predicted Functional Partners:
S4RFB7_PETMA
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.998
S4RYY5_PETMA
Ribosomal protein L11.
  
 
 0.998
S4R765_PETMA
Ribosomal protein L26.
  
 
 0.996
S4RFI6_PETMA
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.996
S4RQ77_PETMA
SEC61 translocon gamma subunit.
   
 0.996
S4RWR0_PETMA
Ribosomal protein L8.
  
 
 0.996
S4R4U3_PETMA
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.995
S4RJX8_PETMA
Signal sequence receptor, gamma.
   
 0.995
S4RMY0_PETMA
Ribosomal protein L12.
  
 
 0.995
S4RV01_PETMA
Si:dkey-159f12.2; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.995
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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