Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R857_PETMAGlycine receptor, beta a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (168 aa)    
Predicted Functional Partners:
S4RDG2_PETMA
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 
0.966
S4R9V1_PETMA
Glycine receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 
0.965
S4R6K6_PETMA
Gephyrin.
    
 
 0.928
S4RBJ4_PETMA
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
    
 
 0.928
S4RJR1_PETMA
MoCF_biosynth domain-containing protein.
    
 
 0.928
S4RTX6_PETMA
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
    
 
 0.928
S4RA55_PETMA
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
  0.795
S4R5Z9_PETMA
Ubiquitin associated and SH3 domain containing Ba.
      
 0.690
S4RUK4_PETMA
Solute carrier family 32 member 1.
      
 0.672
S4RFN8_PETMA
ANF_receptor domain-containing protein.
   
 
 0.662
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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