Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R860_PETMABiotinidase. (481 aa)    
Predicted Functional Partners:
HLCS
Holocarboxylase synthetase.
    
 0.944
AASS
Aminoadipate-semialdehyde synthase.
    
 0.821
S4RKS5_PETMA
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.742
S4RDK6_PETMA
Glutamic pyruvate transaminase (alanine aminotransferase) 2.
  
 
 0.716
S4RCP3_PETMA
Nudix (nucleoside diphosphate linked moiety X)-type motif 15; Belongs to the Nudix hydrolase family.
    
  0.668
S4RNG9_PETMA
Nicotinamide nucleotide adenylyltransferase 2.
  
 
 0.661
S4RSL4_PETMA
Nicotinamide-nucleotide adenylyltransferase.
  
 
 0.661
S4R6S7_PETMA
Fatty acid amide hydrolase 2b.
    
 0.655
S4RTK6_PETMA
Fatty acid amide hydrolase.
    
 0.655
S4R7X5_PETMA
5-oxoprolinase, ATP-hydrolysing.
    
  0.642
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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