Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R861_PETMAFibroblast growth factor (acidic) intracellular binding protein b. (368 aa)    
Predicted Functional Partners:
S4RW54_PETMA
Uncharacterized protein.
    
 
 0.974
S4RFL2_PETMA
C2 domain-containing protein.
    
 
 0.918
S4RIV6_PETMA
C2 calcium dependent domain containing 5.
    
 
 0.918
S4RHI4_PETMA
Cdk5 and Abl enzyme substrate 1.
    
 
 0.876
GRAMD1A
GRAM domain containing 1A.
    
   0.669
S4RLE1_PETMA
Mitochondrial ribosomal protein S33.
   
  
 0.608
S4RAX8_PETMA
Uncharacterized protein.
   
   0.571
S4RRA4_PETMA
Mortality factor 4 like 1.
    
 0.559
FBLN5
Fibulin 5.
 
      0.555
S4R848_PETMA
Uncharacterized protein.
    
  0.515
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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