Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R863_PETMASRCR domain-containing protein. (222 aa)    
Predicted Functional Partners:
S4RGY8_PETMA
Serine palmitoyltransferase, long chain base subunit 1.
      
 0.842
S4RHT7_PETMA
Uncharacterized protein.
    
 0.759
S4RPT5_PETMA
Metalloendopeptidase.
     
 0.688
S4RKF2_PETMA
Uncharacterized protein.
    
 
 0.686
S4RKX3_PETMA
Guanylate kinase 1.
    
 
 0.684
S4RMZ5_PETMA
Guanylate kinase 1.
    
 
 0.684
S4R6W8_PETMA
Zgc:171480.
      
 0.633
S4R4W7_PETMA
Ring finger protein 146.
      
 0.609
S4RMJ2_PETMA
Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).
      
 0.592
S4R7R0_PETMA
Heat shock protein 90, beta (grp94), member 1.
    
  0.588
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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