Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R871_PETMAUncharacterized protein. (107 aa)    
Predicted Functional Partners:
S4R4M6_PETMA
ProRS-C_1 domain-containing protein.
  
 0.999
S4R4M7_PETMA
Uncharacterized protein.
  
 0.999
S4R5V3_PETMA
tRNA-synt_1 domain-containing protein.
  
 0.999
S4RHW9_PETMA
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
   
 0.999
LARS
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
S4RVJ0_PETMA
Lysine--tRNA ligase.
  
 0.999
S4RWF6_PETMA
Aminoacyl tRNA synthetase complex interacting multifunctional protein 1a.
  
 0.999
S4RXX3_PETMA
Aspartyl-tRNA synthetase.
  
 0.998
S4RTM3_PETMA
tRNA-binding domain-containing protein.
  
 0.997
S4RMR4_PETMA
Glutamyl-tRNA(Gln) amidotransferase, subunit B.
  
 0.989
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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