Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R880_PETMAUncharacterized protein. (113 aa)    
Predicted Functional Partners:
S4RKT8_PETMA
Protein kinase domain-containing protein.
    
 0.796
S4RND2_PETMA
Calcium/calmodulin-dependent protein kinase II alpha.
   
 0.792
S4RU19_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.792
S4R6E7_PETMA
PBPe domain-containing protein.
    
 0.765
S4R5Z1_PETMA
Uncharacterized protein.
    
 0.581
S4RH64_PETMA
Uncharacterized protein.
    
 0.581
S4R845_PETMA
Tyrosine-protein kinase.
    
 0.544
S4R9A0_PETMA
Protein kinase domain-containing protein.
    
 0.544
TIAM2
T cell lymphoma invasion and metastasis 2.
     
 0.544
S4RQW9_PETMA
Uncharacterized protein.
    
 0.544
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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