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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XPO1Importin N-terminal domain-containing protein. (1072 aa)    
Predicted Functional Partners:
S4RHF3_PETMA
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.950
RANBP2
RAN binding protein 2.
   
 
 0.950
S4RH17_PETMA
Uncharacterized protein.
    
 0.896
S4RW40_PETMA
Nup214_FG domain-containing protein.
    
 0.896
S4RBB2_PETMA
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.894
S4RKG8_PETMA
Adhesion G protein-coupled receptor D1.
   
 0.894
S4RXH6_PETMA
Nucleoporin 88.
    
 0.872
S4RAV4_PETMA
Peptidase S59 domain-containing protein.
    
 0.817
S4RYI9_PETMA
Peptidase S59 domain-containing protein.
    
 0.817
S4RGF0_PETMA
Nucleoporin 42.
     
 0.760
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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